WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y38H6C.8.1 Sequence Name  Y38H6C.8.1
Length (nt)  1367   Chromosome Location  V: 20513961-20515732
Chromosome . Primary Identifier  V Chromosome Location . Start  20513961
Chromosome Location . End  20515732 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38H6C.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012621 Y38H6C.8 Y38H6C.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y38H6C.8 Y38H6C.8 477   V: 20514766-20514848

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y38H6C.8.1 20513961 20515732 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon219665   888   V: 20513961-20514848 Caenorhabditis elegans
Exon219666   119   V: 20514899-20515017 Caenorhabditis elegans
Exon219667   360   V: 20515373-20515732 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y38H6C.8.1 20513961 20515732 1

1 Sequence

Length
1367

1 Sequence Ontology Term

Identifier Name Description
transcript