WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y38H6C.13.1 Sequence Name  Y38H6C.13.1
Length (nt)  945   Chromosome Location  V: 20527793-20529260
Chromosome . Primary Identifier  V Chromosome Location . Start  20527793
Chromosome Location . End  20529260 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38H6C.13.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012625 Y38H6C.13 Y38H6C.13 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y38H6C.13 Y38H6C.13 240   V: 20527875-20527954

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y38H6C.13.1 20527793 20529260 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon219706   162   V: 20527793-20527954 Caenorhabditis elegans
Exon219707   82   V: 20528256-20528337 Caenorhabditis elegans
Exon219708   548   V: 20528387-20528934 Caenorhabditis elegans
Exon219709   153   V: 20529108-20529260 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y38H6C.13.1 20527793 20529260 1

1 Sequence

Length
945

1 Sequence Ontology Term

Identifier Name Description
transcript