WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y38H6C.15.1 Sequence Name  Y38H6C.15.1
Length (nt)  697   Chromosome Location  V: 20534746-20536308
Chromosome . Primary Identifier  V Chromosome Location . Start  20534746
Chromosome Location . End  20536308 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38H6C.15.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012627 Y38H6C.15 Y38H6C.15 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y38H6C.15 Y38H6C.15 558   V: 20534801-20534926

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y38H6C.15.1 20534746 20536308 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon219739   181   V: 20534746-20534926 Caenorhabditis elegans
Exon219740   192   V: 20535558-20535749 Caenorhabditis elegans
Exon219741   180   V: 20535803-20535982 Caenorhabditis elegans
Exon219742   144   V: 20536165-20536308 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y38H6C.15.1 20534746 20536308 -1

1 Sequence

Length
697

1 Sequence Ontology Term

Identifier Name Description
transcript