WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F26F2.7b.1 Sequence Name  F26F2.7b.1
Length (nt)  2462   Chromosome Location  V: 20580990-20590339
Chromosome . Primary Identifier  V Chromosome Location . Start  20580990
Chromosome Location . End  20590339 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F26F2.7b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009172 F26F2.7 F26F2.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F26F2.7b F26F2.7b 2145   V: 20581041-20581066

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F26F2.7b.1 20580990 20590339 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon219822   77   V: 20580990-20581066 Caenorhabditis elegans
Exon219825   165   V: 20581110-20581274 Caenorhabditis elegans
Exon219827   76   V: 20581372-20581447 Caenorhabditis elegans
Exon219829   94   V: 20581550-20581643 Caenorhabditis elegans
Exon219830   103   V: 20582074-20582176 Caenorhabditis elegans
Exon219833   166   V: 20582534-20582699 Caenorhabditis elegans
Exon219835   112   V: 20582830-20582941 Caenorhabditis elegans
Exon219838   107   V: 20583213-20583319 Caenorhabditis elegans
Exon219842   384   V: 20584674-20585057 Caenorhabditis elegans
Exon219845   165   V: 20586630-20586794 Caenorhabditis elegans
Exon219849   106   V: 20587679-20587784 Caenorhabditis elegans
Exon219853   195   V: 20588437-20588631 Caenorhabditis elegans
Exon219857   83   V: 20589111-20589193 Caenorhabditis elegans
Exon219861   113   V: 20589243-20589355 Caenorhabditis elegans
Exon219867   516   V: 20589824-20590339 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F26F2.7b.1 20580990 20590339 1

1 Sequence

Length
2462

1 Sequence Ontology Term

Identifier Name Description
transcript