WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F46B3.3b.1 Sequence Name  F46B3.3b.1
Length (nt)  459   Chromosome Location  V: 20603324-20604422
Chromosome . Primary Identifier  V Chromosome Location . Start  20603324
Chromosome Location . End  20604422 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F46B3.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009758 ttr-11 F46B3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F46B3.3b F46B3.3b 285   V: 20603366-20603374

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F46B3.3b.1 20603324 20604422 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon219904   51   V: 20603324-20603374 Caenorhabditis elegans
Exon219906   133   V: 20603421-20603553 Caenorhabditis elegans
Exon219909   80   V: 20603928-20604007 Caenorhabditis elegans
Exon219911   40   V: 20604052-20604091 Caenorhabditis elegans
Exon219914   155   V: 20604268-20604422 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F46B3.3b.1 20603324 20604422 1

1 Sequence

Length
459

1 Sequence Ontology Term

Identifier Name Description
transcript