WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F46B3.5.1 Sequence Name  F46B3.5.1
Length (nt)  3133   Chromosome Location  V: 20609794-20613929
Chromosome . Primary Identifier  V Chromosome Location . Start  20609794
Chromosome Location . End  20613929 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F46B3.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001691 grd-2 F46B3.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F46B3.5 F46B3.5 2841   V: 20609889-20609979

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F46B3.5.1 20609794 20613929 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon219951   186   V: 20609794-20609979 Caenorhabditis elegans
Exon219952   278   V: 20610463-20610740 Caenorhabditis elegans
Exon219953   463   V: 20610796-20611258 Caenorhabditis elegans
Exon219954   107   V: 20611303-20611409 Caenorhabditis elegans
Exon219955   603   V: 20611464-20612066 Caenorhabditis elegans
Exon219956   375   V: 20612116-20612490 Caenorhabditis elegans
Exon219957   60   V: 20612537-20612596 Caenorhabditis elegans
Exon219958   345   V: 20612662-20613006 Caenorhabditis elegans
Exon219959   136   V: 20613048-20613183 Caenorhabditis elegans
Exon219960   254   V: 20613231-20613484 Caenorhabditis elegans
Exon219961   60   V: 20613559-20613618 Caenorhabditis elegans
Exon219962   266   V: 20613664-20613929 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F46B3.5.1 20609794 20613929 1

1 Sequence

Length
3133

1 Sequence Ontology Term

Identifier Name Description
transcript