WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F46B3.9.1 Sequence Name  F46B3.9.1
Length (nt)  600   Chromosome Location  V: 20625186-20626143
Chromosome . Primary Identifier  V Chromosome Location . Start  20625186
Chromosome Location . End  20626143 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F46B3.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009762 F46B3.9 F46B3.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F46B3.9 F46B3.9 600   V: 20625186-20625226

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F46B3.9.1 20625186 20626143 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon219963   41   V: 20625186-20625226 Caenorhabditis elegans
Exon219964   84   V: 20625271-20625354 Caenorhabditis elegans
Exon219965   90   V: 20625399-20625488 Caenorhabditis elegans
Exon219966   90   V: 20625533-20625622 Caenorhabditis elegans
Exon219967   81   V: 20625715-20625795 Caenorhabditis elegans
Exon219968   75   V: 20625843-20625917 Caenorhabditis elegans
Exon219969   72   V: 20625962-20626033 Caenorhabditis elegans
Exon219970   67   V: 20626077-20626143 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F46B3.9.1 20625186 20626143 -1

1 Sequence

Length
600

1 Sequence Ontology Term

Identifier Name Description
transcript