WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W01F3.3c.1 Sequence Name  W01F3.3c.1
Length (nt)  9028   Chromosome Location  V: 20667209-20678160
Chromosome . Primary Identifier  V Chromosome Location . Start  20667209
Chromosome Location . End  20678160 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W01F3.3c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012186 mlt-11 W01F3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W01F3.3c W01F3.3c 9003   V: 20667234-20667279

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W01F3.3c.1 20667209 20678160 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon220100   71   V: 20667209-20667279 Caenorhabditis elegans
Exon220109   132   V: 20667329-20667460 Caenorhabditis elegans
Exon220117   128   V: 20667515-20667642 Caenorhabditis elegans
Exon220129   538   V: 20668173-20668710 Caenorhabditis elegans
Exon220137   224   V: 20668760-20668983 Caenorhabditis elegans
Exon220147   745   V: 20669027-20669771 Caenorhabditis elegans
Exon220153   957   V: 20670007-20670963 Caenorhabditis elegans
Exon220161   255   V: 20671017-20671271 Caenorhabditis elegans
Exon220168   1578   V: 20671459-20673036 Caenorhabditis elegans
Exon220175   1413   V: 20673147-20674559 Caenorhabditis elegans
Exon220184   285   V: 20674605-20674889 Caenorhabditis elegans
Exon220192   1704   V: 20674941-20676644 Caenorhabditis elegans
Exon220200   225   V: 20676691-20676915 Caenorhabditis elegans
Exon220209   615   V: 20676964-20677578 Caenorhabditis elegans
Exon220215   158   V: 20678003-20678160 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W01F3.3c.1 20667209 20678160 1

1 Sequence

Length
9028

1 Sequence Ontology Term

Identifier Name Description
transcript