WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:W01F3.1a Sequence Name  W01F3.1a
Length (nt)  1593   Chromosome Location  V: 20654695-20654746
Chromosome . Primary Identifier  V Chromosome Location . Start  20654695
Chromosome Location . End  20654746
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W01F3.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE26981 MNR-1, isoform a 60.7 530 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00054528
WBRNAi00019469
WBRNAi00113582

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:W01F3.1a 20654695 20654746 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012184 mnr-1 W01F3.1 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:W01F3.1a 20654695 20654746 1
CDS:W01F3.1a 20655831 20655965 1
CDS:W01F3.1a 20656174 20656335 1
CDS:W01F3.1a 20656944 20657089 1
CDS:W01F3.1a 20657138 20657428 1
CDS:W01F3.1a 20657929 20658048 1
CDS:W01F3.1a 20658096 20658398 1
CDS:W01F3.1a 20658605 20658722 1
CDS:W01F3.1a 20659005 20659116 1
CDS:W01F3.1a 20659371 20659524 1

1 Sequence

Length
1593

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:W01F3.1a.1 W01F3.1a.1 1856   V: 20654652-20659744