WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W01F3.3f.1 Sequence Name  W01F3.3f.1
Length (nt)  7178   Chromosome Location  V: 20667205-20678160
Chromosome . Primary Identifier  V Chromosome Location . Start  20667205
Chromosome Location . End  20678160 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W01F3.3f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012186 mlt-11 W01F3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W01F3.3f W01F3.3f 7149   V: 20667234-20667279

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W01F3.3f.1 20667205 20678160 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon220133   75   V: 20667205-20667279 Caenorhabditis elegans
Exon220146   132   V: 20667329-20667460 Caenorhabditis elegans
Exon220154   128   V: 20667515-20667642 Caenorhabditis elegans
Exon220166   262   V: 20668449-20668710 Caenorhabditis elegans
Exon220174   224   V: 20668760-20668983 Caenorhabditis elegans
Exon220183   745   V: 20669027-20669771 Caenorhabditis elegans
Exon220190   957   V: 20670007-20670963 Caenorhabditis elegans
Exon220198   255   V: 20671017-20671271 Caenorhabditis elegans
Exon220212   1413   V: 20673147-20674559 Caenorhabditis elegans
Exon220221   285   V: 20674605-20674889 Caenorhabditis elegans
Exon220229   1704   V: 20674941-20676644 Caenorhabditis elegans
Exon220237   225   V: 20676691-20676915 Caenorhabditis elegans
Exon220246   615   V: 20676964-20677578 Caenorhabditis elegans
Exon220250   158   V: 20678003-20678160 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W01F3.3f.1 20667205 20678160 1

1 Sequence

Length
7178

1 Sequence Ontology Term

Identifier Name Description
transcript