WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W01F3.3b.1 Sequence Name  W01F3.3b.1
Length (nt)  9766   Chromosome Location  V: 20667234-20678536
Chromosome . Primary Identifier  V Chromosome Location . Start  20667234
Chromosome Location . End  20678536 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W01F3.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012186 mlt-11 W01F3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W01F3.3b W01F3.3b 9390   V: 20667234-20667279

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:W01F3.3b.1 20667234 20678536 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon220084   46   V: 20667234-20667279 Caenorhabditis elegans
Exon220088   132   V: 20667329-20667460 Caenorhabditis elegans
Exon220096   128   V: 20667515-20667642 Caenorhabditis elegans
Exon220104   387   V: 20667716-20668102 Caenorhabditis elegans
Exon220108   538   V: 20668173-20668710 Caenorhabditis elegans
Exon220116   224   V: 20668760-20668983 Caenorhabditis elegans
Exon220126   745   V: 20669027-20669771 Caenorhabditis elegans
Exon220132   957   V: 20670007-20670963 Caenorhabditis elegans
Exon220140   255   V: 20671017-20671271 Caenorhabditis elegans
Exon220147   1578   V: 20671459-20673036 Caenorhabditis elegans
Exon220154   1413   V: 20673147-20674559 Caenorhabditis elegans
Exon220163   285   V: 20674605-20674889 Caenorhabditis elegans
Exon220171   1704   V: 20674941-20676644 Caenorhabditis elegans
Exon220179   225   V: 20676691-20676915 Caenorhabditis elegans
Exon220188   615   V: 20676964-20677578 Caenorhabditis elegans
Exon220200   534   V: 20678003-20678536 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:W01F3.3b.1 20667234 20678536 1

1 Sequence

Length
9766

1 Sequence Ontology Term

Identifier Name Description
transcript