WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W01F3.3a.1 Sequence Name  W01F3.3a.1
Length (nt)  6925   Chromosome Location  V: 20667211-20678534
Chromosome . Primary Identifier  V Chromosome Location . Start  20667211
Chromosome Location . End  20678534 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W01F3.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012186 mlt-11 W01F3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W01F3.3a W01F3.3a 6528   V: 20667234-20667279

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W01F3.3a.1 20667211 20678534 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon220135   69   V: 20667211-20667279 Caenorhabditis elegans
Exon220141   132   V: 20667329-20667460 Caenorhabditis elegans
Exon220149   128   V: 20667515-20667642 Caenorhabditis elegans
Exon220157   387   V: 20667716-20668102 Caenorhabditis elegans
Exon220161   538   V: 20668173-20668710 Caenorhabditis elegans
Exon220169   224   V: 20668760-20668983 Caenorhabditis elegans
Exon220179   745   V: 20669027-20669771 Caenorhabditis elegans
Exon220185   957   V: 20670007-20670963 Caenorhabditis elegans
Exon220193   255   V: 20671017-20671271 Caenorhabditis elegans
Exon220214   129   V: 20674431-20674559 Caenorhabditis elegans
Exon220216   285   V: 20674605-20674889 Caenorhabditis elegans
Exon220224   1704   V: 20674941-20676644 Caenorhabditis elegans
Exon220232   225   V: 20676691-20676915 Caenorhabditis elegans
Exon220241   615   V: 20676964-20677578 Caenorhabditis elegans
Exon220253   532   V: 20678003-20678534 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W01F3.3a.1 20667211 20678534 1

1 Sequence

Length
6925

1 Sequence Ontology Term

Identifier Name Description
transcript