WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W01F3.3d.1 Sequence Name  W01F3.3d.1
Length (nt)  9740   Chromosome Location  V: 20667234-20678537
Chromosome . Primary Identifier  V Chromosome Location . Start  20667234
Chromosome Location . End  20678537 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W01F3.3d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012186 mlt-11 W01F3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W01F3.3d W01F3.3d 9363   V: 20667234-20667279

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:W01F3.3d.1 20667234 20678537 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon220086   46   V: 20667234-20667279 Caenorhabditis elegans
Exon220090   132   V: 20667329-20667460 Caenorhabditis elegans
Exon220098   128   V: 20667515-20667642 Caenorhabditis elegans
Exon220105   387   V: 20667716-20668102 Caenorhabditis elegans
Exon220110   538   V: 20668173-20668710 Caenorhabditis elegans
Exon220118   224   V: 20668760-20668983 Caenorhabditis elegans
Exon220123   718   V: 20669027-20669744 Caenorhabditis elegans
Exon220134   957   V: 20670007-20670963 Caenorhabditis elegans
Exon220142   255   V: 20671017-20671271 Caenorhabditis elegans
Exon220149   1578   V: 20671459-20673036 Caenorhabditis elegans
Exon220156   1413   V: 20673147-20674559 Caenorhabditis elegans
Exon220165   285   V: 20674605-20674889 Caenorhabditis elegans
Exon220173   1704   V: 20674941-20676644 Caenorhabditis elegans
Exon220181   225   V: 20676691-20676915 Caenorhabditis elegans
Exon220190   615   V: 20676964-20677578 Caenorhabditis elegans
Exon220202   535   V: 20678003-20678537 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:W01F3.3d.1 20667234 20678537 1

1 Sequence

Length
9740

1 Sequence Ontology Term

Identifier Name Description
transcript