WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F53F8.4.1 Sequence Name  F53F8.4.1
Length (nt)  957   Chromosome Location  V: 20690582-20691685
Chromosome . Primary Identifier  V Chromosome Location . Start  20690582
Chromosome Location . End  20691685 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53F8.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010001 F53F8.4 F53F8.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F53F8.4 F53F8.4 762   V: 20690776-20691144

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F53F8.4.1 20690582 20691685 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon220223   563   V: 20690582-20691144 Caenorhabditis elegans
Exon220224   106   V: 20691192-20691297 Caenorhabditis elegans
Exon220225   218   V: 20691345-20691562 Caenorhabditis elegans
Exon220226   70   V: 20691616-20691685 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F53F8.4.1 20690582 20691685 -1

1 Sequence

Length
957

1 Sequence Ontology Term

Identifier Name Description
transcript