WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W07A8.2a.1 Sequence Name  W07A8.2a.1
Length (nt)  3334   Chromosome Location  V: 20717869-20729269
Chromosome . Primary Identifier  V Chromosome Location . Start  20717869
Chromosome Location . End  20729269 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W07A8.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012319 ipla-3 W07A8.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W07A8.2a W07A8.2a 3072   V: 20718052-20718130

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:W07A8.2a.1 20717869 20729269 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon220254   262   V: 20717869-20718130 Caenorhabditis elegans
Exon220261   80   V: 20718179-20718258 Caenorhabditis elegans
Exon220268   249   V: 20718571-20718819 Caenorhabditis elegans
Exon220276   161   V: 20719507-20719667 Caenorhabditis elegans
Exon220282   119   V: 20719914-20720032 Caenorhabditis elegans
Exon220291   260   V: 20723839-20724098 Caenorhabditis elegans
Exon220297   412   V: 20724571-20724982 Caenorhabditis elegans
Exon220303   110   V: 20725515-20725624 Caenorhabditis elegans
Exon220309   165   V: 20725816-20725980 Caenorhabditis elegans
Exon220315   206   V: 20726155-20726360 Caenorhabditis elegans
Exon220321   239   V: 20726489-20726727 Caenorhabditis elegans
Exon220327   202   V: 20726828-20727029 Caenorhabditis elegans
Exon220333   70   V: 20727082-20727151 Caenorhabditis elegans
Exon220342   115   V: 20727197-20727311 Caenorhabditis elegans
Exon220345   140   V: 20727361-20727500 Caenorhabditis elegans
Exon220351   217   V: 20727549-20727765 Caenorhabditis elegans
Exon220357   154   V: 20727975-20728128 Caenorhabditis elegans
Exon220363   103   V: 20728646-20728748 Caenorhabditis elegans
Exon220371   70   V: 20729200-20729269 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:W07A8.2a.1 20717869 20729269 -1

1 Sequence

Length
3334

1 Sequence Ontology Term

Identifier Name Description
transcript