WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W07A8.2b.1 Sequence Name  W07A8.2b.1
Length (nt)  3326   Chromosome Location  V: 20717874-20729272
Chromosome . Primary Identifier  V Chromosome Location . Start  20717874
Chromosome Location . End  20729272 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W07A8.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012319 ipla-3 W07A8.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W07A8.2b W07A8.2b 3066   V: 20718052-20718130

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:W07A8.2b.1 20717874 20729272 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon220257   257   V: 20717874-20718130 Caenorhabditis elegans
Exon220263   80   V: 20718179-20718258 Caenorhabditis elegans
Exon220270   249   V: 20718571-20718819 Caenorhabditis elegans
Exon220278   161   V: 20719507-20719667 Caenorhabditis elegans
Exon220284   119   V: 20719914-20720032 Caenorhabditis elegans
Exon220293   260   V: 20723839-20724098 Caenorhabditis elegans
Exon220299   412   V: 20724571-20724982 Caenorhabditis elegans
Exon220305   110   V: 20725515-20725624 Caenorhabditis elegans
Exon220311   165   V: 20725816-20725980 Caenorhabditis elegans
Exon220317   206   V: 20726155-20726360 Caenorhabditis elegans
Exon220323   239   V: 20726489-20726727 Caenorhabditis elegans
Exon220329   202   V: 20726828-20727029 Caenorhabditis elegans
Exon220335   70   V: 20727082-20727151 Caenorhabditis elegans
Exon220339   109   V: 20727197-20727305 Caenorhabditis elegans
Exon220347   140   V: 20727361-20727500 Caenorhabditis elegans
Exon220353   217   V: 20727549-20727765 Caenorhabditis elegans
Exon220359   154   V: 20727975-20728128 Caenorhabditis elegans
Exon220364   103   V: 20728646-20728748 Caenorhabditis elegans
Exon220372   73   V: 20729200-20729272 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:W07A8.2b.1 20717874 20729272 -1

1 Sequence

Length
3326

1 Sequence Ontology Term

Identifier Name Description
transcript