WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y44A6C.2.1 Sequence Name  Y44A6C.2.1
Length (nt)  1360   Chromosome Location  V: 20722234-20723789
Chromosome . Primary Identifier  V Chromosome Location . Start  20722234
Chromosome Location . End  20723789 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y44A6C.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012851 Y44A6C.2 Y44A6C.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y44A6C.2 Y44A6C.2 1065   V: 20722329-20722408

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y44A6C.2.1 20722234 20723789 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon220288   175   V: 20722234-20722408 Caenorhabditis elegans
Exon220289   448   V: 20722461-20722908 Caenorhabditis elegans
Exon220290   737   V: 20723053-20723789 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y44A6C.2.1 20722234 20723789 1

1 Sequence

Length
1360

1 Sequence Ontology Term

Identifier Name Description
transcript