WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W07A8.3a.1 Sequence Name  W07A8.3a.1
Length (nt)  2693   Chromosome Location  V: 20729951-20744339
Chromosome . Primary Identifier  V Chromosome Location . Start  20729951
Chromosome Location . End  20744339 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W07A8.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001043 dnj-25 W07A8.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W07A8.3a W07A8.3a 2355   V: 20730269-20730412

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:W07A8.3a.1 20729951 20744339 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon220395   462   V: 20729951-20730412 Caenorhabditis elegans
Exon220397   129   V: 20731190-20731318 Caenorhabditis elegans
Exon220401   96   V: 20731618-20731713 Caenorhabditis elegans
Exon220417   92   V: 20736240-20736331 Caenorhabditis elegans
Exon220421   129   V: 20736382-20736510 Caenorhabditis elegans
Exon220425   116   V: 20736560-20736675 Caenorhabditis elegans
Exon220429   332   V: 20737371-20737702 Caenorhabditis elegans
Exon220433   191   V: 20738726-20738916 Caenorhabditis elegans
Exon220437   98   V: 20738963-20739060 Caenorhabditis elegans
Exon220442   131   V: 20739720-20739850 Caenorhabditis elegans
Exon220444   225   V: 20742386-20742610 Caenorhabditis elegans
Exon220446   170   V: 20743355-20743524 Caenorhabditis elegans
Exon220448   61   V: 20743582-20743642 Caenorhabditis elegans
Exon220450   103   V: 20743695-20743797 Caenorhabditis elegans
Exon220452   164   V: 20743852-20744015 Caenorhabditis elegans
Exon220454   129   V: 20744094-20744222 Caenorhabditis elegans
Exon220456   65   V: 20744275-20744339 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:W07A8.3a.1 20729951 20744339 -1

1 Sequence

Length
2693

1 Sequence Ontology Term

Identifier Name Description
transcript