WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W07A8.3a.1 Sequence Name  W07A8.3a.1
Length (nt)  2693   Chromosome Location  V: 20729951-20744339
Chromosome . Primary Identifier  V Chromosome Location . Start  20729951
Chromosome Location . End  20744339 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W07A8.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001043 dnj-25 W07A8.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W07A8.3a W07A8.3a 2355   V: 20730269-20730412

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:W07A8.3a.1 20729951 20744339 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon220375   462   V: 20729951-20730412 Caenorhabditis elegans
Exon220377   129   V: 20731190-20731318 Caenorhabditis elegans
Exon220381   96   V: 20731618-20731713 Caenorhabditis elegans
Exon220397   92   V: 20736240-20736331 Caenorhabditis elegans
Exon220401   129   V: 20736382-20736510 Caenorhabditis elegans
Exon220405   116   V: 20736560-20736675 Caenorhabditis elegans
Exon220409   332   V: 20737371-20737702 Caenorhabditis elegans
Exon220413   191   V: 20738726-20738916 Caenorhabditis elegans
Exon220417   98   V: 20738963-20739060 Caenorhabditis elegans
Exon220422   131   V: 20739720-20739850 Caenorhabditis elegans
Exon220424   225   V: 20742386-20742610 Caenorhabditis elegans
Exon220426   170   V: 20743355-20743524 Caenorhabditis elegans
Exon220428   61   V: 20743582-20743642 Caenorhabditis elegans
Exon220430   103   V: 20743695-20743797 Caenorhabditis elegans
Exon220432   164   V: 20743852-20744015 Caenorhabditis elegans
Exon220434   129   V: 20744094-20744222 Caenorhabditis elegans
Exon220436   65   V: 20744275-20744339 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:W07A8.3a.1 20729951 20744339 -1

1 Sequence

Length
2693

1 Sequence Ontology Term

Identifier Name Description
transcript