WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W07A8.3b.1 Sequence Name  W07A8.3b.1
Length (nt)  1377   Chromosome Location  V: 20730269-20739769
Chromosome . Primary Identifier  V Chromosome Location . Start  20730269
Chromosome Location . End  20739769 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W07A8.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001043 dnj-25 W07A8.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W07A8.3b W07A8.3b 1377   V: 20730269-20730412

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W07A8.3b.1 20730269 20739769 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon220396   144   V: 20730269-20730412 Caenorhabditis elegans
Exon220398   129   V: 20731190-20731318 Caenorhabditis elegans
Exon220402   96   V: 20731618-20731713 Caenorhabditis elegans
Exon220418   92   V: 20736240-20736331 Caenorhabditis elegans
Exon220422   129   V: 20736382-20736510 Caenorhabditis elegans
Exon220426   116   V: 20736560-20736675 Caenorhabditis elegans
Exon220430   332   V: 20737371-20737702 Caenorhabditis elegans
Exon220434   191   V: 20738726-20738916 Caenorhabditis elegans
Exon220438   98   V: 20738963-20739060 Caenorhabditis elegans
Exon220441   50   V: 20739720-20739769 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W07A8.3b.1 20730269 20739769 -1

1 Sequence

Length
1377

1 Sequence Ontology Term

Identifier Name Description
transcript