WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W07A8.3a.1 Sequence Name  W07A8.3a.1
Length (nt)  2693   Chromosome Location  V: 20729951-20744339
Chromosome . Primary Identifier  V Chromosome Location . Start  20729951
Chromosome Location . End  20744339 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W07A8.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001043 dnj-25 W07A8.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W07A8.3a W07A8.3a 2355   V: 20730269-20730412

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:W07A8.3a.1 20729951 20744339 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon220429   462   V: 20729951-20730412 Caenorhabditis elegans
Exon220431   129   V: 20731190-20731318 Caenorhabditis elegans
Exon220435   96   V: 20731618-20731713 Caenorhabditis elegans
Exon220451   92   V: 20736240-20736331 Caenorhabditis elegans
Exon220455   129   V: 20736382-20736510 Caenorhabditis elegans
Exon220459   116   V: 20736560-20736675 Caenorhabditis elegans
Exon220463   332   V: 20737371-20737702 Caenorhabditis elegans
Exon220467   191   V: 20738726-20738916 Caenorhabditis elegans
Exon220471   98   V: 20738963-20739060 Caenorhabditis elegans
Exon220476   131   V: 20739720-20739850 Caenorhabditis elegans
Exon220478   225   V: 20742386-20742610 Caenorhabditis elegans
Exon220480   170   V: 20743355-20743524 Caenorhabditis elegans
Exon220482   61   V: 20743582-20743642 Caenorhabditis elegans
Exon220484   103   V: 20743695-20743797 Caenorhabditis elegans
Exon220486   164   V: 20743852-20744015 Caenorhabditis elegans
Exon220488   129   V: 20744094-20744222 Caenorhabditis elegans
Exon220490   65   V: 20744275-20744339 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:W07A8.3a.1 20729951 20744339 -1

1 Sequence

Length
2693

1 Sequence Ontology Term

Identifier Name Description
transcript