WormMine: Gene WBGene00201730

• WormBase Gene ID: WBGene00201730
• Gene Name: F38A6.8
• Sequence Name: F38A6.8
• Organism: Caenorhabditis elegans
• Automated Description: Enriched in CEPsoDL; arcade cell; and posterior arcade cell based on single-cell RNA-seq studies. Is affected by ogt-1 based on RNA-seq studies.
• Biotype: SO:0001263
• Genetic Position: :±
• Length (nt): 297

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00201730

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:F38A6.8	F38A6.8	297	V: 20763537-20763833

Other

0 CDSs

0 RNAi Result

11 Allele

• gk963271
• gk964176
• gk962705
• gk963489
• gk963304
• gk963809
• WBVar00073881
• gk267887
• gk267888
• gk663328
• gk382485

1 Chromosome

• WormBase ID: V
• Organism: Caenorhabditis elegans
• Length (nt): 20924180

1 Chromosome Location

• Feature . Primary Identifier: WBGene00201730
• Start: 20763537
• End: 20763833
• Strand: 1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

1 Downstream Intergenic Region

• WormBase ID: intergenic_region_chrV_20763834..20764970
• Length (nt): 1137
• Chromosome Location: V: 20763834-20764970
• Organism: Caenorhabditis elegans

2 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Transcripts that showed significantly increased expression in ogt-1(ok1474) neuronal cells isolated by FACs comparing to in FACs isolated neuronal cells from wild type.	DESeq2, fold change > 2, FDR < 0.05.	WBPaper00066485:ogt-1(ok1474)_upregulated_neuron
	Single-cell RNA-Seq cell group 15_0 expressed in epithelium.	scVI 0.6.0	WBPaper00065841:15_0

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00201730
• Start: 20763537
• End: 20763833
• Strand: 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 297

1 Sequence Ontology Term