WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F38A6.2b Sequence Name  F38A6.2b
Length (nt)  2667   Chromosome Location  V: 20765009-20765131
Chromosome . Primary Identifier  V Chromosome Location . Start  20765009
Chromosome Location . End  20765131
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F38A6.2b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE43695 ELP-1, isoform b 98.1 888 Caenorhabditis elegans
 

Other

16 RNAi

WormBase ID
WBRNAi00084817
WBRNAi00000527
WBRNAi00046679
WBRNAi00084823
WBRNAi00014534
WBRNAi00107914
WBRNAi00031946
WBRNAi00084824
WBRNAi00084822
WBRNAi00084825
WBRNAi00084819
WBRNAi00084818
WBRNAi00084820
WBRNAi00070726
WBRNAi00084821
WBRNAi00070727

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F38A6.2b 20765009 20765131 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001248 elp-1 F38A6.2 Caenorhabditis elegans

16 Locations


Feature . Primary Identifier
Start End Strand
CDS:F38A6.2b 20765009 20765131 -1
CDS:F38A6.2b 20765536 20765633 -1
CDS:F38A6.2b 20765682 20765946 -1
CDS:F38A6.2b 20765995 20766309 -1
CDS:F38A6.2b 20766358 20766621 -1
CDS:F38A6.2b 20766680 20766802 -1
CDS:F38A6.2b 20766848 20766988 -1
CDS:F38A6.2b 20767036 20767372 -1
CDS:F38A6.2b 20767424 20767574 -1
CDS:F38A6.2b 20767626 20767691 -1
CDS:F38A6.2b 20767740 20767837 -1
CDS:F38A6.2b 20767898 20767978 -1
CDS:F38A6.2b 20768350 20768695 -1
CDS:F38A6.2b 20768749 20768848 -1
CDS:F38A6.2b 20768899 20768984 -1
CDS:F38A6.2b 20769072 20769144 -1

1 Sequence

Length
2667

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F38A6.2b.1 F38A6.2b.1 2667   V: 20765009-20769144