WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y44A6D.2 Sequence Name  Y44A6D.2
Length (nt)  231   Chromosome Location  V: 20789549-20789563
Chromosome . Primary Identifier  V Chromosome Location . Start  20789549
Chromosome Location . End  20789563
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y44A6D.2

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE19160 TPAN-1 7.4 76 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00000858
WBRNAi00002038
WBRNAi00056549
WBRNAi00020580
WBRNAi00037073

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y44A6D.2 20789549 20789563 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012853 tpan-1 Y44A6D.2 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y44A6D.2 20789549 20789563 1
CDS:Y44A6D.2 20789688 20789825 1
CDS:Y44A6D.2 20790404 20790481 1

1 Sequence

Length
231

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y44A6D.2.1 Y44A6D.2.1 581   V: 20789502-20790784