WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y44A6D.3b.1 Sequence Name  Y44A6D.3b.1
Length (nt)  975   Chromosome Location  V: 20790770-20792421
Chromosome . Primary Identifier  V Chromosome Location . Start  20790770
Chromosome Location . End  20792421 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y44A6D.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012854 Y44A6D.3 Y44A6D.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y44A6D.3b Y44A6D.3b 693   V: 20791034-20791357

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y44A6D.3b.1 20790770 20792421 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon220560   588   V: 20790770-20791357 Caenorhabditis elegans
Exon220562   178   V: 20791406-20791583 Caenorhabditis elegans
Exon220564   131   V: 20792170-20792300 Caenorhabditis elegans
Exon220566   78   V: 20792344-20792421 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y44A6D.3b.1 20790770 20792421 -1

1 Sequence

Length
975

1 Sequence Ontology Term

Identifier Name Description
transcript