WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T03D8.6a.1 Sequence Name  T03D8.6a.1
Length (nt)  1818   Chromosome Location  V: 20816570-20818871
Chromosome . Primary Identifier  V Chromosome Location . Start  20816570
Chromosome Location . End  20818871 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T03D8.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011393 T03D8.6 T03D8.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T03D8.6a T03D8.6a 1737   V: 20816651-20816920

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T03D8.6a.1 20816570 20818871 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon220596   351   V: 20816570-20816920 Caenorhabditis elegans
Exon220598   157   V: 20816978-20817134 Caenorhabditis elegans
Exon220600   87   V: 20817182-20817268 Caenorhabditis elegans
Exon220602   325   V: 20817386-20817710 Caenorhabditis elegans
Exon220604   323   V: 20817761-20818083 Caenorhabditis elegans
Exon220606   420   V: 20818225-20818644 Caenorhabditis elegans
Exon220608   155   V: 20818717-20818871 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T03D8.6a.1 20816570 20818871 -1

1 Sequence

Length
1818

1 Sequence Ontology Term

Identifier Name Description
transcript