WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T03D8.1a.1 Sequence Name  T03D8.1a.1
Length (nt)  2177   Chromosome Location  V: 20832379-20837619
Chromosome . Primary Identifier  V Chromosome Location . Start  20832379
Chromosome Location . End  20837619 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T03D8.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003830 num-1 T03D8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T03D8.1a T03D8.1a 1782   V: 20832379-20832533

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T03D8.1a.1 20832379 20837619 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon220687   155   V: 20832379-20832533 Caenorhabditis elegans
Exon220690   97   V: 20833093-20833189 Caenorhabditis elegans
Exon220694   375   V: 20833398-20833772 Caenorhabditis elegans
Exon220699   372   V: 20834025-20834396 Caenorhabditis elegans
Exon220704   111   V: 20834884-20834994 Caenorhabditis elegans
Exon220709   274   V: 20836320-20836593 Caenorhabditis elegans
Exon220714   266   V: 20836775-20837040 Caenorhabditis elegans
Exon220723   527   V: 20837093-20837619 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T03D8.1a.1 20832379 20837619 1

1 Sequence

Length
2177

1 Sequence Ontology Term

Identifier Name Description
transcript