WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T03D8.1d.1 Sequence Name  T03D8.1d.1
Length (nt)  2049   Chromosome Location  V: 20829811-20837224
Chromosome . Primary Identifier  V Chromosome Location . Start  20829811
Chromosome Location . End  20837224 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T03D8.1d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003830 num-1 T03D8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T03D8.1d T03D8.1d 2049   V: 20829811-20829979

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T03D8.1d.1 20829811 20837224 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon220738   169   V: 20829811-20829979 Caenorhabditis elegans
Exon220739   98   V: 20830374-20830471 Caenorhabditis elegans
Exon220740   155   V: 20832379-20832533 Caenorhabditis elegans
Exon220746   97   V: 20833093-20833189 Caenorhabditis elegans
Exon220751   375   V: 20833398-20833772 Caenorhabditis elegans
Exon220756   372   V: 20834025-20834396 Caenorhabditis elegans
Exon220760   111   V: 20834884-20834994 Caenorhabditis elegans
Exon220766   274   V: 20836320-20836593 Caenorhabditis elegans
Exon220771   266   V: 20836775-20837040 Caenorhabditis elegans
Exon220774   132   V: 20837093-20837224 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T03D8.1d.1 20829811 20837224 1

1 Sequence

Length
2049

1 Sequence Ontology Term

Identifier Name Description
transcript