WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T03D8.2.1 Sequence Name  T03D8.2.1
Length (nt)  542   Chromosome Location  V: 20838080-20838768
Chromosome . Primary Identifier  V Chromosome Location . Start  20838080
Chromosome Location . End  20838768 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T03D8.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011391 mrps-12 T03D8.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T03D8.2 T03D8.2 474   V: 20838080-20838226

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T03D8.2.1 20838080 20838768 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon220724   147   V: 20838080-20838226 Caenorhabditis elegans
Exon220725   100   V: 20838271-20838370 Caenorhabditis elegans
Exon220726   128   V: 20838421-20838548 Caenorhabditis elegans
Exon220727   167   V: 20838602-20838768 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T03D8.2.1 20838080 20838768 1

1 Sequence

Length
542

1 Sequence Ontology Term

Identifier Name Description
transcript