WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25C8.3d.1 Sequence Name  F25C8.3d.1
Length (nt)  9792   Chromosome Location  V: 20879854-20898738
Chromosome . Primary Identifier  V Chromosome Location . Start  20879854
Chromosome Location . End  20898738 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25C8.3d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006812 unc-80 F25C8.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25C8.3d F25C8.3d 9792   V: 20879854-20879948

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F25C8.3d.1 20879854 20898738 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

37 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon220788   95   V: 20879854-20879948 Caenorhabditis elegans
Exon220795   75   V: 20880662-20880736 Caenorhabditis elegans
Exon220800   49   V: 20880779-20880827 Caenorhabditis elegans
Exon220805   120   V: 20881241-20881360 Caenorhabditis elegans
Exon220810   132   V: 20881406-20881537 Caenorhabditis elegans
Exon220815   625   V: 20882809-20883433 Caenorhabditis elegans
Exon220820   270   V: 20884253-20884522 Caenorhabditis elegans
Exon220825   159   V: 20884605-20884763 Caenorhabditis elegans
Exon220830   387   V: 20885191-20885577 Caenorhabditis elegans
Exon220835   406   V: 20885622-20886027 Caenorhabditis elegans
Exon220840   224   V: 20886077-20886300 Caenorhabditis elegans
Exon220845   164   V: 20886346-20886509 Caenorhabditis elegans
Exon220850   119   V: 20886583-20886701 Caenorhabditis elegans
Exon220855   419   V: 20887734-20888152 Caenorhabditis elegans
Exon220860   161   V: 20888781-20888941 Caenorhabditis elegans
Exon220865   577   V: 20888994-20889570 Caenorhabditis elegans
Exon220870   102   V: 20889615-20889716 Caenorhabditis elegans
Exon220875   132   V: 20889840-20889971 Caenorhabditis elegans
Exon220879   162   V: 20890252-20890413 Caenorhabditis elegans
Exon220881   114   V: 20890505-20890618 Caenorhabditis elegans
Exon220886   337   V: 20890880-20891216 Caenorhabditis elegans
Exon220891   76   V: 20891263-20891338 Caenorhabditis elegans
Exon220895   27   V: 20891419-20891445 Caenorhabditis elegans
Exon220899   916   V: 20891718-20892633 Caenorhabditis elegans
Exon220904   239   V: 20893261-20893499 Caenorhabditis elegans
Exon220907   36   V: 20893585-20893620 Caenorhabditis elegans
Exon220911   87   V: 20894014-20894100 Caenorhabditis elegans
Exon220916   153   V: 20894147-20894299 Caenorhabditis elegans
Exon220921   402   V: 20894362-20894763 Caenorhabditis elegans
Exon220926   756   V: 20894834-20895589 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F25C8.3d.1 20879854 20898738 1

1 Sequence

Length
9792

1 Sequence Ontology Term

Identifier Name Description
transcript