WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

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mRNA :

WormMine ID  Transcript:F25C8.4.1 Sequence Name  F25C8.4.1
Length (nt)  1759   Chromosome Location  V: 20904169-20907433
Chromosome . Primary Identifier  V Chromosome Location . Start  20904169
Chromosome Location . End  20907433 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25C8.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009106 acs-12 F25C8.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25C8.4 F25C8.4 1653   V: 20904175-20904276

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F25C8.4.1 20904169 20907433 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon220974   108   V: 20904169-20904276 Caenorhabditis elegans
Exon220975   318   V: 20904328-20904645 Caenorhabditis elegans
Exon220976   209   V: 20904696-20904904 Caenorhabditis elegans
Exon220977   172   V: 20904987-20905158 Caenorhabditis elegans
Exon220978   175   V: 20905209-20905383 Caenorhabditis elegans
Exon220979   486   V: 20905641-20906126 Caenorhabditis elegans
Exon220980   291   V: 20907143-20907433 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F25C8.4.1 20904169 20907433 1

1 Sequence

Length
1759

1 Sequence Ontology Term

Identifier Name Description
transcript