WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25C8.5.1 Sequence Name  F25C8.5.1
Length (nt)  1319   Chromosome Location  V: 20910467-20914387
Chromosome . Primary Identifier  V Chromosome Location . Start  20910467
Chromosome Location . End  20914387 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25C8.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044187 ttll-9 F25C8.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25C8.5 F25C8.5 1254   V: 20910532-20910602

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F25C8.5.1 20910467 20914387 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon220988   136   V: 20910467-20910602 Caenorhabditis elegans
Exon220989   84   V: 20910651-20910734 Caenorhabditis elegans
Exon220990   481   V: 20911385-20911865 Caenorhabditis elegans
Exon220991   88   V: 20912547-20912634 Caenorhabditis elegans
Exon220992   197   V: 20912683-20912879 Caenorhabditis elegans
Exon220993   72   V: 20913486-20913557 Caenorhabditis elegans
Exon220994   101   V: 20913712-20913812 Caenorhabditis elegans
Exon220995   128   V: 20913870-20913997 Caenorhabditis elegans
Exon220996   32   V: 20914356-20914387 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F25C8.5.1 20910467 20914387 1

1 Sequence

Length
1319

1 Sequence Ontology Term

Identifier Name Description
transcript