WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y73B3A.20.1 Sequence Name  Y73B3A.20.1
Length (nt)  1186   Chromosome Location  X: 47690-58063
Chromosome . Primary Identifier  X Chromosome Location . Start  47690
Chromosome Location . End  58063 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y73B3A.20.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022221 Y73B3A.20 Y73B3A.20 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y73B3A.20 Y73B3A.20 219   X: 47998-48020

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y73B3A.20.1 47690 58063 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon221065   331   X: 47690-48020 Caenorhabditis elegans
Exon221067   136   X: 48069-48204 Caenorhabditis elegans
Exon221069   54   X: 48269-48322 Caenorhabditis elegans
Exon221071   70   X: 48366-48435 Caenorhabditis elegans
Exon221073   69   X: 48480-48548 Caenorhabditis elegans
Exon221075   69   X: 48694-48762 Caenorhabditis elegans
Exon221077   162   X: 52784-52945 Caenorhabditis elegans
Exon221080   295   X: 57769-58063 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y73B3A.20.1 47690 58063 1

1 Sequence

Length
1186

1 Sequence Ontology Term

Identifier Name Description
transcript