WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T08D2.5 Sequence Name  T08D2.5
Length (nt)  978   Chromosome Location  X: 178242-178331
Chromosome . Primary Identifier  X Chromosome Location . Start  178242
Chromosome Location . End  178331
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T08D2.5

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE21171 T08D2.5 37.5 325 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00052866
WBRNAi00053220
WBRNAi00077889
WBRNAi00004210
WBRNAi00007674
WBRNAi00018442
WBRNAi00035352

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T08D2.5 178242 178331 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011610 T08D2.5 T08D2.5 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:T08D2.5 178242 178331 1
CDS:T08D2.5 178378 178476 1
CDS:T08D2.5 178534 178752 1
CDS:T08D2.5 178807 179376 1

1 Sequence

Length
978

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T08D2.5.1 T08D2.5.1 1167   X: 177375-179394
Transcript:T08D2.5.2 T08D2.5.2 1208   X: 177807-179376