WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T08D2.7 Sequence Name  T08D2.7
Length (nt)  1410   Chromosome Location  X: 182691-182731
Chromosome . Primary Identifier  X Chromosome Location . Start  182691
Chromosome Location . End  182731
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T08D2.7

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE28251 CHKR-1 52.7 469 Caenorhabditis elegans
 

Other

8 RNAi

WormBase ID
WBRNAi00052868
WBRNAi00018444
WBRNAi00077682
WBRNAi00087555
WBRNAi00004972
WBRNAi00087560
WBRNAi00004974
WBRNAi00004975

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T08D2.7 182691 182731 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011612 chkr-1 T08D2.7 Caenorhabditis elegans

13 Locations


Feature . Primary Identifier
Start End Strand
CDS:T08D2.7 182691 182731 1
CDS:T08D2.7 182785 182918 1
CDS:T08D2.7 182967 183097 1
CDS:T08D2.7 183153 183291 1
CDS:T08D2.7 183420 183556 1
CDS:T08D2.7 184184 184291 1
CDS:T08D2.7 184650 184769 1
CDS:T08D2.7 184833 184889 1
CDS:T08D2.7 184937 185023 1
CDS:T08D2.7 185100 185224 1
CDS:T08D2.7 187766 187863 1
CDS:T08D2.7 188120 188199 1
CDS:T08D2.7 190407 190559 1

1 Sequence

Length
1410

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T08D2.7.1 T08D2.7.1 1451   X: 182691-191193