WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M02E1.1a.2 Sequence Name  M02E1.1a.2
Length (nt)  3920   Chromosome Location  X: 326113-334404
Chromosome . Primary Identifier  X Chromosome Location . Start  326113
Chromosome Location . End  334404 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M02E1.1a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019733 M02E1.1 M02E1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M02E1.1a M02E1.1a 3201   X: 326115-326184

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M02E1.1a.2 326113 334404 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon221446   72   X: 326113-326184 Caenorhabditis elegans
Exon221449   169   X: 326241-326409 Caenorhabditis elegans
Exon221452   124   X: 327209-327332 Caenorhabditis elegans
Exon221455   335   X: 327380-327714 Caenorhabditis elegans
Exon221458   233   X: 327765-327997 Caenorhabditis elegans
Exon221461   48   X: 328080-328127 Caenorhabditis elegans
Exon221464   179   X: 328178-328356 Caenorhabditis elegans
Exon221467   399   X: 328780-329178 Caenorhabditis elegans
Exon221470   64   X: 329220-329283 Caenorhabditis elegans
Exon221473   393   X: 329748-330140 Caenorhabditis elegans
Exon221476   602   X: 331896-332497 Caenorhabditis elegans
Exon221478   357   X: 332579-332935 Caenorhabditis elegans
Exon221480   60   X: 333411-333470 Caenorhabditis elegans
Exon221484   885   X: 333520-334404 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M02E1.1a.2 326113 334404 1

1 Sequence

Length
3920

1 Sequence Ontology Term

Identifier Name Description
transcript