WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C04E7.2.1 Sequence Name  C04E7.2.1
Length (nt)  1815   Chromosome Location  X: 353619-357939
Chromosome . Primary Identifier  X Chromosome Location . Start  353619
Chromosome Location . End  357939 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C04E7.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015429 sor-3 C04E7.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C04E7.2 C04E7.2 1596   X: 353620-353658

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C04E7.2.1 353619 357939 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon221501   40   X: 353619-353658 Caenorhabditis elegans
Exon221502   90   X: 353791-353880 Caenorhabditis elegans
Exon221503   147   X: 353930-354076 Caenorhabditis elegans
Exon221504   119   X: 354613-354731 Caenorhabditis elegans
Exon221505   214   X: 354782-354995 Caenorhabditis elegans
Exon221506   82   X: 355137-355218 Caenorhabditis elegans
Exon221507   131   X: 355585-355715 Caenorhabditis elegans
Exon221508   144   X: 355774-355917 Caenorhabditis elegans
Exon221509   156   X: 355967-356122 Caenorhabditis elegans
Exon221510   105   X: 356290-356394 Caenorhabditis elegans
Exon221511   117   X: 356650-356766 Caenorhabditis elegans
Exon221512   122   X: 356821-356942 Caenorhabditis elegans
Exon221513   348   X: 357592-357939 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C04E7.2.1 353619 357939 1

1 Sequence

Length
1815

1 Sequence Ontology Term

Identifier Name Description
transcript