WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R04A9.3.1 Sequence Name  R04A9.3.1
Length (nt)  1159   Chromosome Location  X: 377174-380605
Chromosome . Primary Identifier  X Chromosome Location . Start  377174
Chromosome Location . End  380605 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R04A9.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019863 R04A9.3 R04A9.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R04A9.3 R04A9.3 906   X: 377390-377445

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R04A9.3.1 377174 380605 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon221534   272   X: 377174-377445 Caenorhabditis elegans
Exon221535   159   X: 377491-377649 Caenorhabditis elegans
Exon221536   111   X: 378285-378395 Caenorhabditis elegans
Exon221537   70   X: 378440-378509 Caenorhabditis elegans
Exon221538   115   X: 379260-379374 Caenorhabditis elegans
Exon221539   158   X: 379418-379575 Caenorhabditis elegans
Exon221540   105   X: 380083-380187 Caenorhabditis elegans
Exon221541   87   X: 380395-380481 Caenorhabditis elegans
Exon221542   82   X: 380524-380605 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R04A9.3.1 377174 380605 -1

1 Sequence

Length
1159

1 Sequence Ontology Term

Identifier Name Description
transcript