WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R04A9.4.1 Sequence Name  R04A9.4.1
Length (nt)  835   Chromosome Location  X: 381385-382709
Chromosome . Primary Identifier  X Chromosome Location . Start  381385
Chromosome Location . End  382709 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R04A9.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002060 ife-2 R04A9.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R04A9.4 R04A9.4 687   X: 381527-381734

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R04A9.4.1 381385 382709 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon221546   350   X: 381385-381734 Caenorhabditis elegans
Exon221547   230   X: 382069-382298 Caenorhabditis elegans
Exon221548   172   X: 382378-382549 Caenorhabditis elegans
Exon221549   83   X: 382627-382709 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R04A9.4.1 381385 382709 -1

1 Sequence

Length
835

1 Sequence Ontology Term

Identifier Name Description
transcript