WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R04A9.5.1 Sequence Name  R04A9.5.1
Length (nt)  1670   Chromosome Location  X: 384385-388797
Chromosome . Primary Identifier  X Chromosome Location . Start  384385
Chromosome Location . End  388797 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R04A9.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019864 ceh-93 R04A9.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R04A9.5 R04A9.5 1527   X: 384522-384608

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R04A9.5.1 384385 388797 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon221550   224   X: 384385-384608 Caenorhabditis elegans
Exon221551   515   X: 385282-385796 Caenorhabditis elegans
Exon221552   115   X: 386715-386829 Caenorhabditis elegans
Exon221553   353   X: 386886-387238 Caenorhabditis elegans
Exon221554   166   X: 387771-387936 Caenorhabditis elegans
Exon221555   153   X: 388409-388561 Caenorhabditis elegans
Exon221556   81   X: 388607-388687 Caenorhabditis elegans
Exon221557   63   X: 388735-388797 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R04A9.5.1 384385 388797 -1

1 Sequence

Length
1670

1 Sequence Ontology Term

Identifier Name Description
transcript