WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R04A9.6.1 Sequence Name  R04A9.6.1
Length (nt)  1432   Chromosome Location  X: 397559-400709
Chromosome . Primary Identifier  X Chromosome Location . Start  397559
Chromosome Location . End  400709 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R04A9.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019865 R04A9.6 R04A9.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R04A9.6 R04A9.6 1110   X: 397567-397752

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R04A9.6.1 397559 400709 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon221572   194   X: 397559-397752 Caenorhabditis elegans
Exon221573   159   X: 397805-397963 Caenorhabditis elegans
Exon221574   81   X: 398016-398096 Caenorhabditis elegans
Exon221575   80   X: 398148-398227 Caenorhabditis elegans
Exon221576   176   X: 398442-398617 Caenorhabditis elegans
Exon221577   142   X: 398668-398809 Caenorhabditis elegans
Exon221578   61   X: 400063-400123 Caenorhabditis elegans
Exon221579   539   X: 400171-400709 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R04A9.6.1 397559 400709 1

1 Sequence

Length
1432

1 Sequence Ontology Term

Identifier Name Description
transcript