WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK1193.2a.1 Sequence Name  ZK1193.2a.1
Length (nt)  6434   Chromosome Location  X: 406459-425635
Chromosome . Primary Identifier  X Chromosome Location . Start  406459
Chromosome Location . End  425635 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1193.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022858 ZK1193.2 ZK1193.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1193.2a ZK1193.2a 6393   X: 406490-406651

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:ZK1193.2a.1 406459 425635 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

32 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon221583   193   X: 406459-406651 Caenorhabditis elegans
Exon221586   169   X: 407542-407710 Caenorhabditis elegans
Exon221590   200   X: 407766-407965 Caenorhabditis elegans
Exon221594   140   X: 408015-408154 Caenorhabditis elegans
Exon221598   373   X: 409132-409504 Caenorhabditis elegans
Exon221601   134   X: 409592-409725 Caenorhabditis elegans
Exon221604   110   X: 409832-409941 Caenorhabditis elegans
Exon221608   536   X: 410543-411078 Caenorhabditis elegans
Exon221610   152   X: 411146-411297 Caenorhabditis elegans
Exon221612   237   X: 412092-412328 Caenorhabditis elegans
Exon221614   189   X: 412438-412626 Caenorhabditis elegans
Exon221616   153   X: 413457-413609 Caenorhabditis elegans
Exon221618   36   X: 413653-413688 Caenorhabditis elegans
Exon221620   98   X: 414427-414524 Caenorhabditis elegans
Exon221622   160   X: 414672-414831 Caenorhabditis elegans
Exon221624   222   X: 414878-415099 Caenorhabditis elegans
Exon221626   398   X: 415811-416208 Caenorhabditis elegans
Exon221627   428   X: 416252-416679 Caenorhabditis elegans
Exon221628   165   X: 416722-416886 Caenorhabditis elegans
Exon221629   125   X: 417421-417545 Caenorhabditis elegans
Exon221630   90   X: 417616-417705 Caenorhabditis elegans
Exon221631   133   X: 417750-417882 Caenorhabditis elegans
Exon221632   119   X: 418160-418278 Caenorhabditis elegans
Exon221633   376   X: 418445-418820 Caenorhabditis elegans
Exon221634   152   X: 419153-419304 Caenorhabditis elegans
Exon221635   328   X: 419730-420057 Caenorhabditis elegans
Exon221638   146   X: 422950-423095 Caenorhabditis elegans
Exon221639   80   X: 423143-423222 Caenorhabditis elegans
Exon221640   252   X: 423477-423728 Caenorhabditis elegans
Exon221641   243   X: 423826-424068 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:ZK1193.2a.1 406459 425635 -1

1 Sequence

Length
6434

1 Sequence Ontology Term

Identifier Name Description
transcript