WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK1193.2b.1 Sequence Name  ZK1193.2b.1
Length (nt)  3098   Chromosome Location  X: 406464-415100
Chromosome . Primary Identifier  X Chromosome Location . Start  406464
Chromosome Location . End  415100 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1193.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022858 ZK1193.2 ZK1193.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1193.2b ZK1193.2b 594   X: 406490-406651

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK1193.2b.1 406464 415100 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon221584   188   X: 406464-406651 Caenorhabditis elegans
Exon221587   169   X: 407542-407710 Caenorhabditis elegans
Exon221591   200   X: 407766-407965 Caenorhabditis elegans
Exon221595   140   X: 408015-408154 Caenorhabditis elegans
Exon221599   373   X: 409132-409504 Caenorhabditis elegans
Exon221602   134   X: 409592-409725 Caenorhabditis elegans
Exon221605   110   X: 409832-409941 Caenorhabditis elegans
Exon221609   536   X: 410543-411078 Caenorhabditis elegans
Exon221611   152   X: 411146-411297 Caenorhabditis elegans
Exon221613   237   X: 412092-412328 Caenorhabditis elegans
Exon221615   189   X: 412438-412626 Caenorhabditis elegans
Exon221617   153   X: 413457-413609 Caenorhabditis elegans
Exon221619   36   X: 413653-413688 Caenorhabditis elegans
Exon221621   98   X: 414427-414524 Caenorhabditis elegans
Exon221623   160   X: 414672-414831 Caenorhabditis elegans
Exon221625   223   X: 414878-415100 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK1193.2b.1 406464 415100 -1

1 Sequence

Length
3098

1 Sequence Ontology Term

Identifier Name Description
transcript