WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F52D1.3c Sequence Name  F52D1.3c
Length (nt)  2106   Chromosome Location  X: 450650-450703
Chromosome . Primary Identifier  X Chromosome Location . Start  450650
Chromosome Location . End  450703
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F52D1.3c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE51512 ABU-12, isoform c 76.5 701 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00001824
WBRNAi00047960
WBRNAi00015393
WBRNAi00093385
WBRNAi00093381
WBRNAi00093376

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F52D1.3c 450650 450703 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004127 abu-12 F52D1.3 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:F52D1.3c 450650 450703 -1
CDS:F52D1.3c 450755 450989 -1
CDS:F52D1.3c 451647 452122 -1
CDS:F52D1.3c 452367 452504 -1
CDS:F52D1.3c 452564 452629 -1
CDS:F52D1.3c 452673 452882 -1
CDS:F52D1.3c 454288 454482 -1
CDS:F52D1.3c 455464 455580 -1
CDS:F52D1.3c 455631 455923 -1
CDS:F52D1.3c 455975 456091 -1
CDS:F52D1.3c 456137 456232 -1
CDS:F52D1.3c 457309 457417 -1

1 Sequence

Length
2106

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F52D1.3c.1 F52D1.3c.1 2502   X: 450447-457610