WormMine: Gene WBGene00023035

• WormBase Gene ID: WBGene00023035
• Gene Name: F38G1.t2
• Sequence Name: F38G1.t2
• Organism: Caenorhabditis elegans
• Automated Description: Is affected by lem-2 and emr-1 based on RNA-seq studies.
• Biotype: SO:0001272
• Genetic Position: :±
• Length (nt): 72

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00023035

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:F38G1.t2	F38G1.t2	72	X: 489868-489939

Other

0 CDSs

5 RNAi Result

• WBRNAi00089856
• WBRNAi00027850
• WBRNAi00089986
• WBRNAi00090145
• WBRNAi00090304

4 Allele

• gk963652
• gk963725
• WBVar01600306
• gk5492

1 Chromosome

• WormBase ID: X
• Organism: Caenorhabditis elegans
• Length (nt): 17718942

1 Chromosome Location

• Feature . Primary Identifier: WBGene00023035
• Start: 489868
• End: 489939
• Strand: -1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

0 Downstream Intergenic Region

1 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Genes that showed increased mRNA expression in emr-1(RNAi);lem-2(tm1582) comparing to N2.	Library siggenes in R was applied to select the differentially expressed loci using the false discovery rate-based SAM method. Genes presenting a delta value > 4 were considered to be significantly altered.	WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00023035
• Start: 489868
• End: 489939
• Strand: -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 72

1 Sequence Ontology Term