WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F57C12.4.1 Sequence Name  F57C12.4.1
Length (nt)  4752   Chromosome Location  X: 563711-572701
Chromosome . Primary Identifier  X Chromosome Location . Start  563711
Chromosome Location . End  572701 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F57C12.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003408 mrp-2 F57C12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F57C12.4 F57C12.4 4578   X: 563827-563955

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F57C12.4.1 563711 572701 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon221965   245   X: 563711-563955 Caenorhabditis elegans
Exon221966   178   X: 564399-564576 Caenorhabditis elegans
Exon221967   109   X: 564619-564727 Caenorhabditis elegans
Exon221968   460   X: 564774-565233 Caenorhabditis elegans
Exon221969   255   X: 565283-565537 Caenorhabditis elegans
Exon221970   78   X: 565587-565664 Caenorhabditis elegans
Exon221971   156   X: 566220-566375 Caenorhabditis elegans
Exon221972   155   X: 566424-566578 Caenorhabditis elegans
Exon221973   486   X: 566629-567114 Caenorhabditis elegans
Exon221974   228   X: 567760-567987 Caenorhabditis elegans
Exon221975   142   X: 568034-568175 Caenorhabditis elegans
Exon221976   371   X: 568227-568597 Caenorhabditis elegans
Exon221977   562   X: 568645-569206 Caenorhabditis elegans
Exon221978   660   X: 569890-570549 Caenorhabditis elegans
Exon221979   257   X: 570653-570909 Caenorhabditis elegans
Exon221980   124   X: 570955-571078 Caenorhabditis elegans
Exon221981   183   X: 571123-571305 Caenorhabditis elegans
Exon221982   103   X: 572599-572701 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F57C12.4.1 563711 572701 -1

1 Sequence

Length
4752

1 Sequence Ontology Term

Identifier Name Description
transcript