WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F13C5.2.1 Sequence Name  F13C5.2.1
Length (nt)  1651   Chromosome Location  X: 593960-596293
Chromosome . Primary Identifier  X Chromosome Location . Start  593960
Chromosome Location . End  596293 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F13C5.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017423 F13C5.2 F13C5.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F13C5.2 F13C5.2 1125   X: 593980-594054

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F13C5.2.1 593960 596293 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon222084   95   X: 593960-594054 Caenorhabditis elegans
Exon222085   330   X: 594146-594475 Caenorhabditis elegans
Exon222086   162   X: 594717-594878 Caenorhabditis elegans
Exon222087   370   X: 594929-595298 Caenorhabditis elegans
Exon222088   694   X: 595600-596293 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F13C5.2.1 593960 596293 1

1 Sequence

Length
1651

1 Sequence Ontology Term

Identifier Name Description
transcript