WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F13C5.6a.1 Sequence Name  F13C5.6a.1
Length (nt)  1656   Chromosome Location  X: 611120-621290
Chromosome . Primary Identifier  X Chromosome Location . Start  611120
Chromosome Location . End  621290 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F13C5.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006825 unc-96 F13C5.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F13C5.6a F13C5.6a 1227   X: 611537-611615

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F13C5.6a.1 611120 621290 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon222114   496   X: 611120-611615 Caenorhabditis elegans
Exon222116   140   X: 612708-612847 Caenorhabditis elegans
Exon222118   82   X: 613448-613529 Caenorhabditis elegans
Exon222120   125   X: 613782-613906 Caenorhabditis elegans
Exon222122   118   X: 613955-614072 Caenorhabditis elegans
Exon222124   91   X: 614559-614649 Caenorhabditis elegans
Exon222126   83   X: 614727-614809 Caenorhabditis elegans
Exon222128   137   X: 616983-617119 Caenorhabditis elegans
Exon222130   124   X: 617175-617298 Caenorhabditis elegans
Exon222132   149   X: 620325-620473 Caenorhabditis elegans
Exon222134   111   X: 621180-621290 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F13C5.6a.1 611120 621290 -1

1 Sequence

Length
1656

1 Sequence Ontology Term

Identifier Name Description
transcript