WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M6.3.1 Sequence Name  M6.3.1
Length (nt)  1109   Chromosome Location  X: 633368-636993
Chromosome . Primary Identifier  X Chromosome Location . Start  633368
Chromosome Location . End  636993 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M6.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004011 pha-2 M6.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M6.3 M6.3 645   X: 633719-633862

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M6.3.1 633368 636993 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon222142   495   X: 633368-633862 Caenorhabditis elegans
Exon222143   112   X: 635009-635120 Caenorhabditis elegans
Exon222144   103   X: 635217-635319 Caenorhabditis elegans
Exon222145   126   X: 636500-636625 Caenorhabditis elegans
Exon222146   103   X: 636673-636775 Caenorhabditis elegans
Exon222147   170   X: 636824-636993 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M6.3.1 633368 636993 -1

1 Sequence

Length
1109

1 Sequence Ontology Term

Identifier Name Description
transcript