WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M6.1f.1 Sequence Name  M6.1f.1
Length (nt)  2119   Chromosome Location  X: 643108-645708
Chromosome . Primary Identifier  X Chromosome Location . Start  643108
Chromosome Location . End  645708 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M6.1f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002056 ifc-2 M6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M6.1f M6.1f 1509   X: 643682-644053

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M6.1f.1 643108 645708 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon222167   946   X: 643108-644053 Caenorhabditis elegans
Exon222178   159   X: 644102-644260 Caenorhabditis elegans
Exon222184   168   X: 644309-644476 Caenorhabditis elegans
Exon222190   495   X: 644528-645022 Caenorhabditis elegans
Exon222196   111   X: 645109-645219 Caenorhabditis elegans
Exon222201   240   X: 645469-645708 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M6.1f.1 643108 645708 -1

1 Sequence

Length
2119

1 Sequence Ontology Term

Identifier Name Description
transcript